Insertion junction: CLIP2.058856_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058856
Chromosome:chromosome 5
Location:3095070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755647 (1 of 1) K14404 - cleavage and polyadenylation specificity factor subunit 4 (CPSF4, YTH1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGCCAAACCCGCACACTCGAAGGGCTCTGGGCGTCACCCGAGGCAAA
Internal bar code:AGTTAGGGTATCTGTGAGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1905
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACCTGTCCCTCACATG
Suggested primer 2:TTGGCGATAGTAGCGAGCAG