Insertion junction: CLIP2.058878_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058878
Chromosome:chromosome 10
Location:1167628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425750 (1 of 1) PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 5'UTR
lncRNA_TCONS_00063058 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATAAACTCCCGCATTTTACGACGCTGTCTGTCAACTTGTTGAGCGAGC
Internal bar code:TTCCCTCGAGGGGTGACTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATGCACTTCCCCTGAT
Suggested primer 2:GGCCTGACATGGTGAAGTGA