Insertion junction: CLIP2.059114_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059114
Chromosome:chromosome 9
Location:3517605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396401 SUMT1:COBA,UPM1 S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase; (1 of 1) PTHR21091//PTHR21091:SF16 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // SIROHEME SYNTHASE gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAACCCTCCGGCTGCTTTCCAACCTTAAACTTGTTCTCCTCCAAAGTT
Internal bar code:TATTAAGGGACTTATGAATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:954
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATACGGATGAGGCCAG
Suggested primer 2:GTGTGTCTGCGTGTGTGTTC