| Common name: | SUMT1:COBA,UPM1 |
| Defline: | S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase; (1 of 1) PTHR21091//PTHR21091:SF16 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // SIROHEME SYNTHASE |
| Description: | Siroheme synthesis [Includes: Uroporphyrin-III C-methyltransferase (Urogen III methylase) (SUMT) Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase; Sirohydrochlorin ferrochelatase]; formerly SUMT1--renamed UPM1 by the advice of Sam Beale. |
| Synonyms: | UPM1,g9835.t1,SUMT1:COBA,Cre02.g133050.t1.1 |
| Chromosome: | chromosome 9 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.033596_1 | CLIP2.033596 | intron | 80 | 6.1 |
| CLIP2.056025_1 | CLIP2.056025 | intron | 80 | 6.1 |
| CLIP2.056025_2 | CLIP2.056025 | intron | 80 | 6.1 |
| CLIP2.056444_1 | CLIP2.056444 | 5'UTR | 80 | 6.1 |
| CLIP2.056444_2 | CLIP2.056444 | 5'UTR | 80 | 6.1 |
| CLIP2.057639_1 | CLIP2.057639 | 3'UTR | 80 | 6.1 |
| CLIP2.059114_1 | CLIP2.059114 | gene_edge/mRNA_edge/5'UTR | 80 | 6.1 |
| CLIP2.059114_2 | CLIP2.059114 | gene_edge/mRNA_edge/5'UTR | 80 | 6.1 |
| CLIP2.075869_2 | CLIP2.075869 | intron | 40 | 6.1 |
| LMJ.RY0402.052695_1 | LMJ.RY0402.052695 | intron | 73 | 5.5 |
| LMJ.RY0402.052695_2 | LMJ.RY0402.052695 | CDS | 73 | 5.5 |
| PFAM: | PF00590 |
| PANTHER: | PTHR21091 PTHR21091:SF16 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0006779, GO:0008152, GO:0008168, GO:0055114 |
| Best arabidopsis TAIR name: | AT5G40850 |
| Best arabidopsis TAIR symbol: | UPM1 |
| Best arabidopsis TAIR defline: | urophorphyrin methylase 1 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.