Insertion junction: CLIP2.075869_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075869
Chromosome:chromosome 9
Location:3519946
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g396401 SUMT1:COBA,UPM1 S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase; (1 of 1) PTHR21091//PTHR21091:SF16 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // SIROHEME SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTAAGAGGCTAAAGCCGGGCTGAGTGCATGTGTGTTTATGTGCGGATG
Internal bar code:AGAATTAAGCTGTGATGATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:597
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTACCGCAATCCCCAAC
Suggested primer 2:CGTTATCAACCCAGCCACCT