Insertion junction: CLIP2.059220_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059220
Chromosome:chromosome 6
Location:3099402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275350 ROC40 (1 of 1) PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED; Rhythm Of Chloroplast 40 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGAGCCAGCGCCCGGAGCTTCAAGAAGATTTCCAGCTATTTGTATATT
Internal bar code:CAAATATGAACTCCAGACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1937
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGATTCCGCTCACATCGC
Suggested primer 2:CAAACCCGAAAGCCCAAAGG