Insertion junction: CLIP2.059929_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059929
Chromosome:chromosome 13
Location:4219318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591700 TTL15 (1 of 7) 1.2.1.24 - Succinate-semialdehyde dehydrogenase (NAD(+)); Putative tubulin tyrosine ligase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGTTTGTCGCATGCGCGCCTGCTCAACCAATGAACGCGCGATTGGTC
Internal bar code:ATTTTTCGTGCACGTCTAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCATCAGGCTCTCCATC
Suggested primer 2:GGCTTACCTTGATTGGGCCT