Insertion junction: CLIP2.060023_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060023
Chromosome:chromosome 17
Location:957327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702950 GFY5 (1 of 5) PTHR30178 - INNER MEMBRANE PROTEIN YAAH; Putative acetate transporter 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCCCCTAGGAACAAAATAAAGAAACAAGCGAACCGTGAAGTGGTC
Internal bar code:CGGGTTGTGGTCTCAGTTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1306
LEAP-Seq percent confirming:46.4286
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGCTGCAGTAGGTGATA
Suggested primer 2:GATGCACGATCTAGCGGACA