Insertion junction: CLIP2.060109_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060109
Chromosome:chromosome 3
Location:4504871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175850 EEP1 (1 of 1) K10771 - AP endonuclease 1 (APEX1); putative exodeoxyribonuclease III 3'UTR
Cre03.g175851 (1 of 13) IPR001487 - Bromodomain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAACGGGCCTTTAGCTGCTGCCGCAGTCTCAGTTGCCCACGCTCGTA
Internal bar code:TAGTCACTTTAGGAGGGAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4686
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGAGAGAGGAGGGGTT
Suggested primer 2:TCAACTGCCGGGAGAAGAAC