Insertion junction: CLIP2.060336_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060336
Chromosome:chromosome 12
Location:7367367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557650 (1 of 100) IPR001810 - F-box domain outside_mRNA
Cre12.g557700 (1 of 1) K01069 - hydroxyacylglutathione hydrolase (E3.1.2.6, gloB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAGGATCCGAAGAATGATGTGTATGGCGGTGGTGCGTTCGAATGGG
Internal bar code:AGTCGGGGACCGAAGGGGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGATTGTCTGTGGAAGA
Suggested primer 2:CAGAATGCAGAATGGAGCGC