Insertion junction: CLIP2.060540_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060540
Chromosome:chromosome 12
Location:2152223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509600 CDD2 (1 of 1) K15441 - tRNA-specific adenosine deaminase 2 [EC:3.5.4.-] (TAD2, ADAT2); Cytosine deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGAAACAACAGCGCCACACAGCAAGGAAACAGCACAGCACCCAAGTA
Internal bar code:TCCTTACGGAGTAACTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3432
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGTTCGACGGGTGTGG
Suggested primer 2:TGTCGGGATGATTGCGGAAA