Insertion junction: CLIP2.060611_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060611
Chromosome:chromosome 12
Location:3616512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513150 MIA40 (1 of 1) K17046 - protein DEK (DEK) 5'UTR
Cre12.g513200 PGH1,ENO1,ENO (1 of 1) 4.2.1.11 - Phosphopyruvate hydratase / Enolase; Enolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAAAGTGAGTGTTGACTAGGGCCCCATCGCGGCGCTTCTCTCTTCGT
Internal bar code:TTGTGCCACAGGTTTTTAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCTTGACGCACAGGTTC
Suggested primer 2:GCTGTTCTTCCCCGGTGTTA