Insertion junction: CLIP2.060648_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060648
Chromosome:chromosome 3
Location:4119477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172600 (1 of 1) IPR000104//IPR001841//IPR011990//IPR013083 - Antifreeze protein, type I // Zinc finger, RING-type // Tetratricopeptide-like helical domain // Zinc finger, RING/FYVE/PHD-type 3'UTR
Cre03.g172650 BLD2,TUE1 (1 of 1) K10391 - tubulin epsilon (TUBE); Epsilon tubulin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTATGGCTGTAGGTAGAAGTAGGACAGGGGCACTTAGATCATTGCCG
Internal bar code:GAATGAGTATCCATCTGGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1709
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAAACCTTGTTGCAGG
Suggested primer 2:GATGAGGCGGACATACAGGG