Insertion junction: CLIP2.060835_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060835
Chromosome:chromosome 17
Location:5754744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740950 LHL4,ELIP6,ELI6 (1 of 12) IPR022796//IPR023329 - Chlorophyll A-B binding protein // Chlorophyll a/b binding protein domain; LHC-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAGCCAGACATGGGGCCCAGGATGCCAGACCACTTCAGATAGGTGAT
Internal bar code:ATTATTACTTAGGCCTACGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4822
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTGTTAGGGGAGGTTT
Suggested primer 2:CTCACACGCAAAACCACCTG