Gene: Cre17.g740950
Overview
| Common name: | LHL4,ELIP6,ELI6 |
| Defline: | (1 of 12) IPR022796//IPR023329 - Chlorophyll A-B binding protein // Chlorophyll a/b binding protein domain; LHC-like protein |
| Description: | belongs to chlorophyll A-B binding protein superfamily, ELIP family; characterized by a large stromal loop between helices 2 and 3; first TM helix similar to cyanobacterial HLIPs; this gene was reported in PMID: 15509845 as transiently expressed in high light; Genbank AB159049. |
| Synonyms: | ELIP6,ELI6,Cre17.g740950.t1.1,g17922.t1,LHL4 |
| Chromosome: | chromosome 17 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2B07
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
shapes in cytoplasm/a few medium puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.060835_1 | CLIP2.060835 | 3'UTR | 80 | 6.1 |
| CLIP2.060835_2 | CLIP2.060835 | 3'UTR | 80 | 6.1 |
| CLIP2.061476_1 | CLIP2.061476 | 3'UTR | 80 | 6.1 |
| CLIP2.061476_2 | CLIP2.061476 | 3'UTR | 80 | 6.1 |
| CLIP2.069440_1 | CLIP2.069440 | 5'UTR | 80 | 6.1 |
| CLIP2.069440_2 | CLIP2.069440 | 5'UTR | 80 | 6.1 |
| CLIP2.077733_1 | CLIP2.077733 | 5'UTR | 80 | 6.1 |
| CLIP2.077733_2 | CLIP2.077733 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.214823_1 | LMJ.RY0402.214823 | 3'UTR | 73 | 5.5 |
| LMJ.SG0182.003906_1 | LMJ.SG0182.003906 | intron | 75 | 5.3 |
Gene Annotations
| PFAM: | PF00504 |
| PANTHER: | PTHR14154 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT1G44575.2 |
| Best arabidopsis TAIR symbol: | NPQ4,PSBS |
| Best arabidopsis TAIR defline: | Chlorophyll A-B binding family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.