Insertion junction: CLIP2.077733_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077733
Chromosome:chromosome 17
Location:5756670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740950 LHL4,ELIP6,ELI6 (1 of 12) IPR022796//IPR023329 - Chlorophyll A-B binding protein // Chlorophyll a/b binding protein domain; LHC-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCTTAAATTGCTCCCGCGACCAATGGGTGGCCACCAAACAAGGATGT
Internal bar code:CAAATTGTAAATCAGAACAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTAGGTGTGTGCAGGTC
Suggested primer 2:GTCTGTTGGTGGGAGGGAAG