Insertion junction: CLIP2.061476_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061476
Chromosome:chromosome 17
Location:5754170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740950 LHL4,ELIP6,ELI6 (1 of 12) IPR022796//IPR023329 - Chlorophyll A-B binding protein // Chlorophyll a/b binding protein domain; LHC-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGTCGGCTCCAAGACAGCCTCTCCTCTCCTTGGCGCACTCGGCCCTT
Internal bar code:CATACCCGCAAGGATCCTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3663
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCGGATTGCCTCAGGT
Suggested primer 2:AGAGCTTGCCGAGAGTGAAC