Insertion junction: CLIP2.060893_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060893
Chromosome:chromosome 12
Location:2104048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510100 ATG4,APG4 Autophagy-related protein; (1 of 1) K08342 - cysteine protease ATG4 (ATG4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAACCACATACGGCTTATCATACAGCTGACCGCAACCAAAGTTTTGCT
Internal bar code:TAGCTATCGTTTGAGACAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3370
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCGTCTCTAGCGATTGG
Suggested primer 2:GCGAAAGGCAAAGCTTTCCA