Insertion junction: CLIP2.061208_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061208
Chromosome:chromosome 1
Location:4084572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027100 IMP2 Mitochondrial inner membrane signal peptidase; (1 of 1) K09648 - mitochondrial inner membrane protease subunit 2 (IMP2) 3'UTR
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGATTTCGGCGTGGCGCATGGAAAGGTCCCGTTCACTTTGGAAAAACT
Internal bar code:GGGACTAGTAATGTTCCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGGAGGGGGTTTGATGG
Suggested primer 2:CAACCGTTCCAACCTGCATG