Insertion junction: CLIP2.061267_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061267
Chromosome:chromosome 9
Location:5924283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412000 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCATCAGCACCAACAGCATTGATTGCTAACACGAGTAATCACCAGC
Internal bar code:AGCTATTATATTTCCGCTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAAAGCAGCTGGTGTGG
Suggested primer 2:GGGTAGCCCGAATCCTAACG