Insertion junction: CLIP2.061277_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061277
Chromosome:chromosome 10
Location:2850638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439250 3'UTR
Cre10.g439300 (1 of 41) PTHR10157 - DOPAMINE BETA HYDROXYLASE RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCCGTAGGGTGCAGCTGATTCCCAGAACCCAGCAGATGACAAACAAT
Internal bar code:GCTCACGATGAAATCGTGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1617
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGGATTGATTGGGGCT
Suggested primer 2:GGTATGGATGCGGCGTAAGA