Insertion junction: CLIP2.061408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061408
Chromosome:chromosome 5
Location:3094061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755647 (1 of 1) K14404 - cleavage and polyadenylation specificity factor subunit 4 (CPSF4, YTH1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCAATCGTTCCAGTTTCAAGCTAAAGAATCTAATTCTGCGGCTTTTA
Internal bar code:CGCAGTGCGAACCAATTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGAGGGACAGGTGCAT
Suggested primer 2:CACGAACTGGTGCAAGAAGC