Insertion junction: CLIP2.061523_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061523
Chromosome:chromosome 10
Location:1446911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428100 TMG5 (1 of 1) PTHR10631//PTHR10631:SF2 - N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE // N2, N2-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASES-LIKE PROTEIN; possible N2,N2-dimethylguanosine tRNA methyltransferase 3'UTR
Cre10.g428150 (1 of 1) PTHR10566:SF58 - PROTEIN D2023.6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTATCCGCGTAAGAGTGGCGCCTGGGAACTCATCCAGGCGCTCGTGGC
Internal bar code:GTGCTCCAGGGTCCAGAGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTGTGACAGGTTGCTA
Suggested primer 2:AGTTTCCCCTGTGCTCGATG