Insertion junction: CLIP2.061529_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061529
Chromosome:plastome
Location:65580
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802291 ChreCp027,psbZ,2716976 photosystem II reaction center Z protein; (1 of 1) K02724 - photosystem II PsbZ protein (psbZ) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACATCCTTTTGTAAATAGAACCTAAAAAGGAAAAAAATTGAATTTAA
Internal bar code:TTTGGCTCTGATCGAGCTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACTTTGGGGCTGCACAG
Suggested primer 2:CCCTTCCGGGCAAGTAAACT