Insertion junction: CLIP2.061959_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061959
Chromosome:chromosome 1
Location:4668591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032300 GBP1 G-strand telomere DNA binding protein; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCAAAAAAACAGTTCCATTTACACCGCGTAGTAAACTGACGGGGTGG
Internal bar code:TAAGTACTTGTCGGACCCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4883
LEAP-Seq percent confirming:94.5205
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCTGACTTCTGTGCAGG
Suggested primer 2:TGTGCAACAGCCAAACCATG