Insertion junction: CLIP2.062087_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062087
Chromosome:chromosome 1
Location:3816171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024950 (1 of 1) PTHR12444//PTHR12444:SF0 - UNCHARACTERIZED // PROTEIN EFR3 HOMOLOG CMP44E 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTAAGCGAAGCGGTCCAGGGGGTCTGCCCTACAGTGCCCTCCACGGG
Internal bar code:TATAGAGGCCGTAGTCATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1925
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGGATGTGAGGAGCTA
Suggested primer 2:CTTCAACGATAAGCCGCTGC