Insertion junction: CLIP2.062536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062536
Chromosome:chromosome 11
Location:1983831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467772 CYCD1 D-type cyclin; (1 of 10) PTHR10177 - CYCLINE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCGTGTGGGTGGTGGTTTCTGCCGTGTGCGCGTCCGTGTGCGTGCCC
Internal bar code:ACCCACGAGACCCGGTACCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1720
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAAATAGGCCCGGACTC
Suggested primer 2:ACCGTACATGATTGTGCCGT