Insertion junction: CLIP2.062611_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062611
Chromosome:chromosome 10
Location:5343075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456851 TMG4 tRNA (guanine-N1)-methyltransferase; (1 of 3) 2.1.1.221 - tRNA (guanine(9)-N(1))-methyltransferase / tRNA m(1)G(9)-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGACCAAACGCATTGTTGCTTCGTGTGGGAATGTGTGTGGGCTGTAAG
Internal bar code:TAGTGGCGCTTTGTCGTCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1637
LEAP-Seq percent confirming:58.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCTATCTGGGATGCGCG
Suggested primer 2:CAATGTTACGTGGCTGCAGG