Insertion junction: CLIP2.062644_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062644
Chromosome:chromosome 5
Location:3361921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232751 (1 of 2) PTHR23518:SF2 - MULTIDRUG RESISTANCE PROTEIN MDTH 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTCCACGCCAGCAGGGGCTTCCCCTAGATCCCCACTGCAGTCGGCAC
Internal bar code:AGGGCAGAATCTGATTATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGATAACACGGCTTGCCA
Suggested primer 2:TTTTCACCAGGGCCGTCTAC