Insertion junction: CLIP2.062708_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062708
Chromosome:chromosome 10
Location:3241457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442600 UAPA2,XUV5 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAACACTCCAGCCTGATCCATCACACATCACTGGCCCATCGCCAGCA
Internal bar code:AGTACTAGTTATTCAGAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1551
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACTTTGCTGACGCTTGC
Suggested primer 2:TTACTAGCCGCAGCAGTGAC