Insertion junction: CLIP2.062708_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062708
Chromosome:chromosome 10
Location:3241458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442600 UAPA2,XUV5 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAACCCAACATGTCATTGTGGCATGCATGCAAGTGGCTCTCGCGGAG
Internal bar code:AGTACTAGTTATTCAGAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2925
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTAGCCGCAGCAGTGAC
Suggested primer 2:TCAACTTTGCTGACGCTTGC