Insertion junction: CLIP2.062786_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062786
Chromosome:chromosome 8
Location:557215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359650 (1 of 15) 3.4.21.72 - IgA-specific serine endopeptidase / Immunoglobulin A1 protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCTTAAACGCATGTAACGCTCCACCCCACACTACCCATGCGCACAA
Internal bar code:TTTCGGCGCCTTTGTTCTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1110
LEAP-Seq percent confirming:74.2424
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGCAACTCCATTACCCT
Suggested primer 2:TTCACAGTAGCCCCGAACAC