Insertion junction: CLIP2.062928_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062928
Chromosome:chromosome 4
Location:3082588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225400 (1 of 79) IPR011992 - EF-hand domain pair 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGATTCAAGTCTGGGCTTGTTGAGAGAACGGACGGGAGAGCGCATTGA
Internal bar code:ATGCAGATTCCTTTTAGGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAGGATTGACGTCTGG
Suggested primer 2:CAAAGGCGGAGATTGCGATG