Insertion junction: CLIP2.062953_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062953
Chromosome:chromosome 10
Location:1645431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429450 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCGGACAGCACCTTACGAGACCATACTTAAAAACTAGTCTTGTGCA
Internal bar code:AGAGCTAGGAGGCAAGTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:6222
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTGGCAACCTGCTGAAC
Suggested primer 2:AGGTGGCCCAGTAATGAAGC