Insertion junction: CLIP2.062955_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062955
Chromosome:chromosome 17
Location:1305210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705450 LCI26 Low-CO2-induced U-box protein; (1 of 1) PTHR22849//PTHR22849:SF45 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGCGAGCCCAGGCGCCAGCTCAAACCGCGAAACTTGCAAGCCTGTGG
Internal bar code:GTCTTCACTTAGCTATTGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGGGCATGACAGGGATA
Suggested primer 2:CTGGACAGGAAGACAAGCGT