Insertion junction: CLIP2.063018_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063018
Chromosome:chromosome 3
Location:3511550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167500 3'UTR
Cre03.g167550 POC3,CEP290 Proteome of centriole protein 3; (1 of 1) K16533 - centrosomal protein CEP290 (CEP290, NPHP6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGACGATGCACCGCTACATGAAGCATTTGAGTGGCTTGGCCACTGT
Internal bar code:TAGGCTGTGCCGGTGGGATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1838
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTAAGGTTCCTGAGCA
Suggested primer 2:TCGTGGGTTGAGGATTGGTG