Gene: Cre03.g167550

Overview

Common name:POC3,CEP290
Defline:Proteome of centriole protein 3; (1 of 1) K16533 - centrosomal protein CEP290 (CEP290, NPHP6)
Description:Found in basal body proteome; Transition Zone Protein; Human homolog cep290 localizes to centrosome, and is also called 3H11 antigen
Synonyms:POC3,CEP290,g3439.t1
Chromosome:chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.011864_3 CLIP2.011864 intron 80 6.1
CLIP2.011864_4 CLIP2.011864 intron 80 6.1
CLIP2.025005_1 CLIP2.025005 intron 80 6.1
CLIP2.032008_1 CLIP2.032008 intron 80 6.1
CLIP2.032008_2 CLIP2.032008 intron 80 6.1
CLIP2.035677_1 CLIP2.035677 CDS 80 6.1
CLIP2.037079_1 CLIP2.037079 CDS 80 6.1
CLIP2.037079_2 CLIP2.037079 CDS 80 6.1
CLIP2.046884_1 CLIP2.046884 CDS 80 6.1
CLIP2.046884_2 CLIP2.046884 CDS 80 6.1
CLIP2.058760_3 CLIP2.058760 5'UTR 80 6.1
CLIP2.058760_4 CLIP2.058760 5'UTR 80 6.1
CLIP2.063018_1 CLIP2.063018 3'UTR 80 6.1
CLIP2.074937_1 CLIP2.074937 3'UTR 80 6.1
LMJ.RY0402.094271_1 LMJ.RY0402.094271 intron 73 5.5
LMJ.RY0402.143997_1 LMJ.RY0402.143997 intron 95 5.5
LMJ.RY0402.143997_2 LMJ.RY0402.143997 intron 95 5.5
LMJ.RY0402.166500_1 LMJ.RY0402.166500 CDS 95 5.5
LMJ.RY0402.166500_2 LMJ.RY0402.166500 CDS 95 5.5
LMJ.RY0402.221562_1 LMJ.RY0402.221562 intron 95 5.5
LMJ.RY0402.221562_2 LMJ.RY0402.221562 intron 95 5.5
LMJ.RY0402.233934_1 LMJ.RY0402.233934 intron 73 5.5

Gene Annotations

PFAM:
PANTHER: PTHR18879 PTHR18879:SF18
KEGG_ec:
KEGG_orthology:K16533
KOG:KOG0978
Gene ontology terms::GO:0005634, GO:0005813, GO:0060271
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Flagella, screen 3 of 6 ( 79% confidence (FDR = 0.21))
LAT002C07, screen 1 of 1 ( 94% confidence (FDR = 0.06))
Low iron media, screen 1 of 1 ( 91% confidence (FDR = 0.083))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.