Insertion junction: CLIP2.063099_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063099
Chromosome:chromosome 16
Location:7525177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682699 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTCATTGGCATGGATCGATGGCGCTGTCGGGAGAATCATGATGCACT
Internal bar code:CTTCTGGGCAAACTATGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2334
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTACGCAACAAACAGCA
Suggested primer 2:CTTGCACGTTCCTTGTGTGG