Insertion junction: CLIP2.063262_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063262
Chromosome:chromosome 9
Location:3474423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396102 (1 of 1) K08856 - serine/threonine kinase 16 [EC:2.7.11.1] (STK16) 5'UTR
Cre09.g396139 (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACACTTCGTGATGCTTTAAACTTATTCTTGCATAAGTAGAGAATGTT
Internal bar code:GCTGCACTGTCCGACCGTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGGGTGATGTTGCAAT
Suggested primer 2:TGTTGGGTTTTGTAGCGGGT