Insertion junction: CLIP2.063509_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063509
Chromosome:chromosome 6
Location:6292274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292650 ROC93 (1 of 3) K06236 - collagen, type I/II/III/V/XI/XXIV/XXVII, alpha (COL1AS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCAGGTTCCGCAGGCTGATCGCGCACGCAGGACTGCCGCACTTCTG
Internal bar code:GAAACTTTGAATCCAGGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1126
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGCAATGCCAAGATAGC
Suggested primer 2:TGCCAAGATGTGCGTGTACT