Insertion junction: CLIP2.063891_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063891
Chromosome:chromosome 12
Location:2103995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510100 ATG4,APG4 Autophagy-related protein; (1 of 1) K08342 - cysteine protease ATG4 (ATG4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCATATCACGGCATCTCGCTCCAGTCCGGAACAAAAGCCCACACACTG
Internal bar code:TAGAGTCCATTCTGTATCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4994
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCGTCTCTAGCGATTGG
Suggested primer 2:GCGAAAGGCAAAGCTTTCCA