Insertion junction: CLIP2.063932_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063932
Chromosome:chromosome 1
Location:4036731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026650 (1 of 1) PTHR23293//PTHR23293:SF5 - FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE // PHOSPHOADENOSINE PHOSPHOSULFATE REDUCTASE 3'UTR
Cre01.g026700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTTTCTTCTCTTCGTGAAAGTTGTGAAGTTGTTGCGGTCCTTGCAC
Internal bar code:GGCTGCTTACCAATGTCCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2892
LEAP-Seq percent confirming:98.6301
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTAAGTTTTTGGCGCC
Suggested primer 2:CCCTACCTGCAAGCAATCCA