Insertion junction: CLIP2.064516_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064516
Chromosome:chromosome 2
Location:7010857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389652 (1 of 1) PTHR31437//PTHR31437:SF1 - FAMILY NOT NAMED // PROTEIN SREK1IP1 5'UTR
Cre09.g389689 ASD1,ASSD1 Aspartate semialdehyde dehydrogenase; (1 of 1) 1.2.1.11 - Aspartate-semialdehyde dehydrogenase / L-aspartate-beta-semialdehyde dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGATCGATGATGCCCTGCCGTGTGTAACATGGTTAAGATACGTACA
Internal bar code:GCTTGTTAATGAGTGCCATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2731
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGCTATGCCTCTGGTCG
Suggested primer 2:AGGGGGATTGCTGGTGATTG