Gene: Cre09.g389689
Overview
| Common name: | ASD1,ASSD1 |
| Defline: | Aspartate semialdehyde dehydrogenase; (1 of 1) 1.2.1.11 - Aspartate-semialdehyde dehydrogenase / L-aspartate-beta-semialdehyde dehydrogenase |
| Description: | Aspartate semialdehyde dehydrogenase. Previously annotated as ASSD1 |
| Synonyms: | ASD1,Cre02.g124800.t1.2,ASSD1,g9648.t1,Cre02.g124800.t1.1 |
| Chromosome: | chromosome 2 (genome version v6.1), chromosome 9 (genome version v5.5) |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2B02
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/not homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre13.g577100 | ACP2 | Cre09.g389689 | ASD1,ASSD1 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.033428_1 | CLIP2.033428 | intron | 80 | 6.1 |
| CLIP2.033428_2 | CLIP2.033428 | intron | 80 | 6.1 |
| CLIP2.056633_1 | CLIP2.056633 | 3'UTR | 80 | 6.1 |
| CLIP2.062845_1 | CLIP2.062845 | 5'UTR | 80 | 6.1 |
| CLIP2.062845_2 | CLIP2.062845 | 5'UTR | 80 | 6.1 |
| CLIP2.064516_1 | CLIP2.064516 | 3'UTR | 80 | 6.1 |
| CLIP2.064516_2 | CLIP2.064516 | 3'UTR | 80 | 6.1 |
| CLIP2.064917_1 | CLIP2.064917 | 5'UTR | 80 | 6.1 |
| CLIP2.064917_2 | CLIP2.064917 | 5'UTR | 80 | 6.1 |
| CLIP2.067564_1 | CLIP2.067564 | 5'UTR | 80 | 6.1 |
| CLIP2.067564_2 | CLIP2.067564 | 5'UTR | 80 | 6.1 |
| CLIP2.071025_1 | CLIP2.071025 | 5'UTR | 80 | 6.1 |
| CLIP2.071025_2 | CLIP2.071025 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.139607_1 | LMJ.RY0402.139607 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.168930_1 | LMJ.RY0402.168930 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.168930_2 | LMJ.RY0402.168930 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.242089_1 | LMJ.RY0402.242089 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.242089_2 | LMJ.RY0402.242089 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF01118, PF02774 |
| PANTHER: | PTHR10174 PTHR10174:SF2 |
| KEGG_ec: | EC:1.2.1.11 |
| KEGG_orthology: | K00133 |
| KOG: | KOG4777 |
| Gene ontology terms:: | GO:0003942, GO:0004073, GO:0005737, GO:0008652, GO:0009086, GO:0009088, GO:0009089, GO:0009097, GO:0016620, GO:0046983, GO:0050661, GO:0051287, GO:0055114 |
| Best arabidopsis TAIR name: | AT1G14810 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | semialdehyde dehydrogenase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.