Insertion junction: CLIP2.064521_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064521
Chromosome:chromosome 12
Location:1357623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489150 SHD1 SH2-domain protein; (1 of 2) IPR000980 - SH2 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTATAGGTAATCCTGGCGCAACCACTCGCAAGAAATTGAGACCCATTT
Internal bar code:GAAGTTTTCGTACCCCCATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3403
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGGAACTCGCAACTCA
Suggested primer 2:ACACTCCCTAGCCGAGTCAT