Insertion junction: CLIP2.065239_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065239
Chromosome:chromosome 9
Location:5015803
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g405701 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGACTAGCAAGTGACGAAACGCGTGTTCTATGAATTAGCTCAGCTCA
Internal bar code:GGTATGTCTAGCTTCCTCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCAGTGCTGTACGAAG
Suggested primer 2:ACGCATGCAAAACAGTGGTC