Insertion junction: CLIP2.065371_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065371
Chromosome:chromosome 12
Location:5082402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525650 SUFS,SUFS1,CSD4 (1 of 1) K11717 - cysteine desulfurase / selenocysteine lyase (sufS); Group II cysteine desulfurase outside_mRNA
Cre12.g525700 HCS1 Cytochrome c heme lyase; (1 of 2) 4.4.1.17 - Holocytochrome-c synthase / Cytochrome c synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTATGTGTATATAGCGCTCATTACGCGTGTGTAATAATTGAGTCGCA
Internal bar code:TGGACCTGTATTACAATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1537
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACGTCTACACCAGCCTT
Suggested primer 2:GTCCAGGTAGACCAGGGGAT