Insertion junction: CLIP2.065417_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065417
Chromosome:chromosome 3
Location:6497848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193750 GCST,GCST1 Glycine cleavage system, T protein; (1 of 1) K00605 - aminomethyltransferase (gcvT, AMT) 3'UTR
Cre03.g193800 TSN1 Aspartyl-tRNA synthetase; (1 of 1) 6.1.1.22 - Asparagine--tRNA ligase / Asparaginyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGCGGATTACGAATGGTGGTAGTGCTGAACACAGCCCCGGCGTAACA
Internal bar code:CTGATAGTCGTATAGGACACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2839
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGGACGGTTTTTGAACC
Suggested primer 2:GCCGTAATACTCCATCGCCA