Insertion junction: CLIP2.065510_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065510
Chromosome:chromosome 16
Location:7056039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674515 IDA7,DIC3,IA1-IC140,IC140 (1 of 1) PTHR12442//PTHR12442:SF5 - DYNEIN INTERMEDIATE CHAIN // WD REPEAT-CONTAINING PROTEIN 63; Flagellar Inner Arm Dynein I1/f Intermediate Chain 5'UTR
Cre16.g674627 MKS1,B9D1 (1 of 1) K16744 - B9 domain-containing protein 1 (B9D1); B9 Domain-Containing transition zone protein 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTTGAGCGCGAGACGAAGCTAGACGCACCTGGCTATCTTCTGCAATG
Internal bar code:GTGGCCCACCTCATCGTGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2186
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CATATGCGCCGTTTGTCCTG
Suggested primer 2:AGTAGAAACGAGACGCGCAA