Insertion junction: CLIP2.065536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065536
Chromosome:chromosome 3
Location:6172657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191150 (1 of 1) PTHR23322//PTHR23322:SF6 - FAS-ASSOCIATED PROTEIN // UBX DOMAIN-CONTAINING PROTEIN 7 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCAAGGTAACACGGATACGGGATAGTGAGCTGCCGGGAATTCACGAA
Internal bar code:AAAGATCTGGAGTCGGCCTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:922
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGAGCGACAGGATGGT
Suggested primer 2:CCTCAGGCAGCTTGAACAGA